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=== 7T Scanner Operation === | === 7T Scanner Operation === | ||
* Checklist for | * Checklist for [https://wikihost.uib.no/mriwiki/images/9/9d/Checklist_for_training_new_MRI_users.pdf '''training new MRI users'''] | ||
* How to | * How to [https://wiki.uib.no/mriwiki/images/6/60/How_to_Create_New_User_MRI_PV6.01.pdf '''create a new user on the MRI workstation'''] | ||
* How to | * How to [https://wiki.uib.no/mriwiki/images/7/73/Checklist_for_when_you_begin_scanning.pdf '''prepare for scanning'''] | ||
* | * How to [https://wiki.uib.no/mriwiki/images/b/b1/How_to_turn_on_the_system.pdf '''turn on the system'''] | ||
* After you have [https://wikihost.uib.no/mriwiki/images/a/a7/Checklist_for_when_you_are_done_scanning.pdf '''finished scanning'''] <br> | |||
* [https://wiki.uib.no/mriwiki/images/ | * [https://wiki.uib.no/mriwiki/images/8/8d/MRI_Survival_Guide.pdf '''7T survival guide'''] - a brief overview over the basics of scanning and transferring of data | ||
* A detailed description of the [https://wikihost.uib.no/mriwiki/images/c/c7/MRI_QA.pdf '''operation of MR scanner'''], including safety, MR system components, MR protocols, resources, etc..., a bit outdated | |||
* A detailed description of the [https://wikihost.uib.no/mriwiki/images/c/c7/MRI_QA.pdf '''operation of MR scanner'''], including safety, MR system components, MR protocols, resources, etc... | * How to use the available [https://wiki.uib.no/mriwiki/images/f/f9/RFCoils.pdf '''RF coils and animal cradles'''] | ||
* A table with different [https://wiki.uib.no/mriwiki/images/0/07/CoilConfigurations.pdf '''coil configurations'''] <br> | * A table with different [https://wiki.uib.no/mriwiki/images/0/07/CoilConfigurations.pdf '''coil configurations'''] <br> | ||
* | * To '''report a technical problem''', provide '''feedback''' or '''ask questions''': please '''email [mailto:Hans.Rolfsnes@uib.no Hans Olav]'''. | ||
* '''[[Manuals]]''' and other sources of help. <br> | * '''[[Manuals]]''' and other sources of help. <br> | ||
=== Pulse Sequences and Protocols === | === Pulse Sequences and Protocols === | ||
* [https://wiki.uib.no/mriwiki/images/b/b8/ProtocolDescriptions.pdf Description of the following MR protocols:] (this is work in progress) | * [https://wiki.uib.no/mriwiki/images/b/b8/ProtocolDescriptions.pdf '''Description of the following MR protocols''':] (this is work in progress) | ||
** Macros | ** Macros | ||
** Shimming strategies | ** Shimming strategies | ||
| Line 29: | Line 29: | ||
=== Data Transfer and Post Processing === | === Data Transfer and Post Processing === | ||
* | * Here is a good explanation of [http://imaging.mrc-cbu.cam.ac.uk/imaging/FormatBruker '''Bruker data format''']. | ||
* How to | * How to [https://wikihost.uib.no/mriwiki/images/1/12/TransferringMRData.pdf '''transfer MRI data'''] from the scanner. | ||
* How to | * How to [https://wiki.uib.no/mriwiki/images/8/8b/How_to_upload_Data_to_Bruker_Server.pdf '''upload data'''] to Bruker server. | ||
* How to | * How to [https://wiki.uib.no/mriwiki/images/3/3c/How_to_start_with_OsiriX.pdf '''start with OsiriX''']. <br> | ||
=== Various === | === Various === | ||
* | * [https://www.bruker.com/service/products/labscape-bruker-biospin-service-life-cycle-support-for-magnetic-resonance-and-imaging/contact-support/contact-us-mri.html '''Bruker hotlines'''] | ||
* [http://imaging.mrc-cbu.cam.ac.uk/methods/unixsurvivalguide Unix Survival Guide] from Cognition and Brain Science unit at Cambridge University | * [http://imaging.mrc-cbu.cam.ac.uk/methods/unixsurvivalguide '''Unix Survival Guide'''] from Cognition and Brain Science unit at Cambridge University.<br> | ||
=== Training === | === Training === | ||
See [[Safety and Operator Training]] | See '''[[Safety and Operator Training]]''' | ||
=== Safety === | === Safety === | ||
* How to | * How to [https://wiki.uib.no/mriwiki/images/9/95/How_to_fill_LN2_on_7T_Pharmascan_at_Vivarium2.pdf '''fill liquid Nitrogen on the MRI system''']. | ||
* How to | * How to [https://wiki.uib.no/mriwiki/images/1/1b/How_to_fill_LHe_on_7T_Pharmascan_at_Vivarium2.pdf'''fill liquid Helium on the MRI system''']. | ||
=== Physiology and | === Animal Physiology, Anesthesia and Handling === | ||
* General questions and answers on animal handling, anesthesia and Vivarium procedures [https://wikihost.uib.no/mriwiki/images/ | * [https://wikihost.uib.no/mriwiki/images/5/55/Answers_AnimalHandling.pdf '''General questions and answers on animal handling, anesthesia and Vivarium procedures''']. | ||
* Procedure on how to | * Procedure on how to use [https://wikihost.uib.no/mriwiki/images/b/b0/Procedure_on_how_to_use_anesthesia_on_small_animals.pdf '''anesthesia on small animals in Vivarium''']. | ||
* Procedure on how to | * Procedure on how to [https://wiki.uib.no/mriwiki/images/3/35/How_to_prepare_animal_for_intravenous_injection.pdf '''prepare the animal for intravenous injection'''] of contrast agent. | ||
* An article on | * Procedure on how to [https://wiki.uib.no/mriwiki/images/9/97/How_to_Use_Injection_Pump.pdf '''use the injection pump'''] for injecting contrast agent intravenously. | ||
* How to | * An article on [https://wikihost.uib.no/mriwiki/images/1/1e/MouseMRIPaper.pdf '''Mouse MRI and general outline for planning a mouse MRI experiment''']. | ||
* How to [https://wikihost.uib.no/mriwiki/images/4/40/Procedure_how_to_clean_the_animals_beds_and_other_equipment.pdf '''clean animal beds and other equipment''']. <br><br> | |||
Latest revision as of 09:18, 12 July 2017
7T Scanner Operation
- Checklist for training new MRI users
- How to create a new user on the MRI workstation
- How to prepare for scanning
- How to turn on the system
- After you have finished scanning
- 7T survival guide - a brief overview over the basics of scanning and transferring of data
- A detailed description of the operation of MR scanner, including safety, MR system components, MR protocols, resources, etc..., a bit outdated
- How to use the available RF coils and animal cradles
- A table with different coil configurations
- To report a technical problem, provide feedback or ask questions: please email Hans Olav.
- Manuals and other sources of help.
Pulse Sequences and Protocols
- Description of the following MR protocols: (this is work in progress)
- Macros
- Shimming strategies
- Diffusion
- Dynamic contrast enhancement DCE
- Arterial spin labeling
- Single-voxel spectroscopy
- Chemical shift-imaging
- Intragate
- Ultra-short TE (UTE)
Data Transfer and Post Processing
- Here is a good explanation of Bruker data format.
- How to transfer MRI data from the scanner.
- How to upload data to Bruker server.
- How to start with OsiriX.
Various
- Bruker hotlines
- Unix Survival Guide from Cognition and Brain Science unit at Cambridge University.
Training
See Safety and Operator Training
Safety
Animal Physiology, Anesthesia and Handling
- General questions and answers on animal handling, anesthesia and Vivarium procedures.
- Procedure on how to use anesthesia on small animals in Vivarium.
- Procedure on how to prepare the animal for intravenous injection of contrast agent.
- Procedure on how to use the injection pump for injecting contrast agent intravenously.
- An article on Mouse MRI and general outline for planning a mouse MRI experiment.
- How to clean animal beds and other equipment.