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* [https://wiki.uib.no/mriwiki/images/d/d1/YourFirstExperiment.pdf '''7T survival guide'''] - a brief overview of scanning and transferring of data | * [https://wiki.uib.no/mriwiki/images/d/d1/YourFirstExperiment.pdf '''7T survival guide'''] - a brief overview of scanning and transferring of data | ||
* | * [https://wikihost.uib.no/mriwiki/images/d/d8/How_to_obtain_your_first_images.pdf '''How to collect your first MR images'''] - a bit outdated. | ||
* A detailed description of the [https://wikihost.uib.no/mriwiki/images/c/c7/MRI_QA.pdf '''operation of MR scanner'''], including safety, MR system components, MR protocols, resources, etc... | * A detailed description of the [https://wikihost.uib.no/mriwiki/images/c/c7/MRI_QA.pdf '''operation of MR scanner'''], including safety, MR system components, MR protocols, resources, etc... | ||
* A table with different [https://wiki.uib.no/mriwiki/images/0/07/CoilConfigurations.pdf '''coil configurations'''] <br> | * A table with different [https://wiki.uib.no/mriwiki/images/0/07/CoilConfigurations.pdf '''coil configurations'''] <br> | ||
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=== Physiology and Anesthesia === | === Physiology and Anesthesia === | ||
* | * [https://wikihost.uib.no/mriwiki/images/5/55/Answers_AnimalHandling.pdf '''General questions and answers on animal handling, anesthesia and Vivarium procedures''']. | ||
* Procedure on how to use [https://wikihost.uib.no/mriwiki/images/b/b0/Procedure_on_how_to_use_anesthesia_on_small_animals.pdf '''anesthesia on small animals in Vivarium''']. | * Procedure on how to use [https://wikihost.uib.no/mriwiki/images/b/b0/Procedure_on_how_to_use_anesthesia_on_small_animals.pdf '''anesthesia on small animals in Vivarium''']. | ||
* Procedure on how to [https://wiki.uib.no/mriwiki/images/9/97/How_to_Use_Injection_Pump.pdf '''use the injection pump'''] for injecting contrast agent intravenously. | * Procedure on how to [https://wiki.uib.no/mriwiki/images/9/97/How_to_Use_Injection_Pump.pdf '''use the injection pump'''] for injecting contrast agent intravenously. | ||
* An article on [https://wikihost.uib.no/mriwiki/images/1/1e/MouseMRIPaper.pdf '''Mouse MRI and general outline for planning a mouse MRI experiment''']. | * An article on [https://wikihost.uib.no/mriwiki/images/1/1e/MouseMRIPaper.pdf '''Mouse MRI and general outline for planning a mouse MRI experiment''']. | ||
* How to [https://wikihost.uib.no/mriwiki/images/4/40/Procedure_how_to_clean_the_animals_beds_and_other_equipment.pdf '''clean animal beds and other equipment''']. <br><br> | * How to [https://wikihost.uib.no/mriwiki/images/4/40/Procedure_how_to_clean_the_animals_beds_and_other_equipment.pdf '''clean animal beds and other equipment''']. <br><br> | ||
Revision as of 10:07, 10 June 2013
7T Scanner Operation
- Checklist for training new MRI users pdf
- How to prepare for scanning pdf
- How to turn on the system pdf
- What to do when finished scanning pdf
- 7T survival guide - a brief overview of scanning and transferring of data
- How to collect your first MR images - a bit outdated.
- A detailed description of the operation of MR scanner, including safety, MR system components, MR protocols, resources, etc...
- A table with different coil configurations
- How to report a technical problem.
- How to provide feedback.
- Manuals and other sources of help.
Pulse Sequences and Protocols
- Description of the following MR protocols: (this is work in progress)
- Macros
- Shimming strategies
- Diffusion
- Dynamic contrast enhancement DCE
- Arterial spin labeling
- Single-voxel spectroscopy
- Chemical shift-imaging
- Intragate
- Ultra-short TE (UTE)
Data Transfer and Post Processing
- Here is a good explanation of Bruker data format.
- How to transfer MRI data from the scanner.
- How to upload data to Bruker server.
- How to start with OsiriX.
Various
- Bruker hotlines
- Unix Survival Guide from Cognition and Brain Science unit at Cambridge University.
- How to install PV5.1 on a Mac using virtual Linux environment.
Training
See Safety and Operator Training
Safety
Physiology and Anesthesia
- General questions and answers on animal handling, anesthesia and Vivarium procedures.
- Procedure on how to use anesthesia on small animals in Vivarium.
- Procedure on how to use the injection pump for injecting contrast agent intravenously.
- An article on Mouse MRI and general outline for planning a mouse MRI experiment.
- How to clean animal beds and other equipment.