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* General questions and answers on animal handling, anesthesia and Vivarium procedures [https://wikihost.uib.no/mriwiki/images/5/55/Answers_AnimalHandling.pdf pdf] | * General questions and answers on animal handling, anesthesia and Vivarium procedures [https://wikihost.uib.no/mriwiki/images/5/55/Answers_AnimalHandling.pdf pdf] | ||
* Procedure on how to use anesthesia on small animals in Vivarium [https://wikihost.uib.no/mriwiki/images/b/b0/Procedure_on_how_to_use_anesthesia_on_small_animals.pdf pdf] | * Procedure on how to use anesthesia on small animals in Vivarium [https://wikihost.uib.no/mriwiki/images/b/b0/Procedure_on_how_to_use_anesthesia_on_small_animals.pdf pdf] | ||
* Procedure on how to use the injection pump for injecting contrast agent intravenously [pdf] | |||
* An article on Mouse MRI and general outline for planning a mouse MRI experiment [https://wikihost.uib.no/mriwiki/images/1/1e/MouseMRIPaper.pdf pdf] | * An article on Mouse MRI and general outline for planning a mouse MRI experiment [https://wikihost.uib.no/mriwiki/images/1/1e/MouseMRIPaper.pdf pdf] | ||
* How to clean animal beds and other equipment [https://wikihost.uib.no/mriwiki/images/4/40/Procedure_how_to_clean_the_animals_beds_and_other_equipment.pdf pdf]. <br><br> | * How to clean animal beds and other equipment [https://wikihost.uib.no/mriwiki/images/4/40/Procedure_how_to_clean_the_animals_beds_and_other_equipment.pdf pdf]. <br><br> | ||
Revision as of 13:45, 4 June 2013
7T Scanner Operation
- Checklist for training new MRI users pdf
- Checklist of things to do to prepare for scanning pdf
- How to turn on the system pdf
- Checklist of things to do when finished scanning pdf
- 7T survival guide - a brief overview of scanning and transferring of data pdf
- How to collect your first MR images -- OLD pdf
- A detailed description of the operation of MR scanner, including safety, MR system components, MR protocols, resources, etc... pdf
- A table with different coil configurations pdf
- How to report a technical problem.
- How to provide feedback.
- Manuals and other sources of help.
Pulse Sequences and Protocols
- Description of the following MR protocols: (this is work in progress)
- Macros
- Shimming strategies
- Diffusion
- Dynamic contrast enhancement DCE
- Arterial spin labeling
- Single-voxel spectroscopy
- Chemical shift-imaging
- Intragate
- Ultra-short TE (UTE)
Data Transfer and Post Processing
- For a good explanation of Bruker data format, see this link.
- How to transfer MRI data from the scanner pdf
- How to upload data to Bruker server pdf
- How to start with OsiriX pdf
Various
- Bruker hotlines pdf
- Unix Survival Guide from Cognition and Brain Science unit at Cambridge University.
- How to install PV5.1 on a Mac using virtual Linux environment.
Training
See Safety and Operator Training
Safety
Physiology and Anesthesia
- General questions and answers on animal handling, anesthesia and Vivarium procedures pdf
- Procedure on how to use anesthesia on small animals in Vivarium pdf
- Procedure on how to use the injection pump for injecting contrast agent intravenously [pdf]
- An article on Mouse MRI and general outline for planning a mouse MRI experiment pdf
- How to clean animal beds and other equipment pdf.